5'-O-(4,4'-Dimethoxytrityl)thymidine

CAS 40615-39-2  ·  C31H32N2O7  ·  MW 544.6 g/mol

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3D model 5'-O-(4,4'-Dimethoxytrityl)thymidine, CAS 40615-39-2, molecular formula C31H32N2O7, molar mass 544.6 g/mol
About 5'-O-(4,4'-Dimethoxytrityl)thymidine

5'-O-(4,4'-Dimethoxytrityl)thymidine is a chemical compound registered under number CAS 40615-39-2, with the molecular formula C31H32N2O7, and a molar mass of 544.6 g/mol.

The molecule contains 72 atoms connected by 76 chemical bonds. The full systematic IUPAC name of this compound is 1-[(2R,4S,5R)-5-[[bis(4-methoxyphenyl)-phenylmethoxy]methyl]-4-hydroxyoxolan-2-yl]-5-methylpyrimidine-2,4-dione. The interactive 3D model above lets you view the spatial arrangement of the atoms — you can rotate it with the mouse, zoom with the scroll wheel, and switch between skeletal / Ball & Stick / Space Fill visualization modes.

In terms of physicochemical properties, the partition coefficient logP = 3.4 (positive value, a lipophilic compound), polar surface area PSA = 107 Ų, 2 donors and 7 hydrogen bond acceptors. These parameters are key when assessing bioavailability and interaction with biomolecules.

Chemical data for this compound comes from PubChem (NIH NLM NCBI), one of the world's largest chemical databases. All information is updated automatically and enriched with GHS hazard statement translations compliant with the CLP Regulation (EC 1272/2008). The widget above may be used for educational, research and commercial purposes.

Physicochemical properties
Molecular formulaC31H32N2O7
Masa molowa544.6 g/mol
IUPAC1-[(2R,4S,5R)-5-[[bis(4-methoxyphenyl)-phenylmethoxy]methyl]-4-hydroxyoxolan-2-yl]-5-methylpyrimidine-2,4-dione
SMILESCC1=CN(C(=O)NC1=O)[C@H]2C[C@@H]([C@H](O2)COC(C3=CC=CC=C3)(C4=CC=C(C=C4)OC)C5=CC=C(C=C5)OC)O
InChIKeyUBTJZUKVKGZHAD-UPRLRBBYSA-N
logP (XLogP3)3.4
PSA107 Ų
HBD / HBA2 / 7
PubChem CIDCID 162419 ↗
GHS safety

Signal word: Warning

GHS07
GHS07

H315 — Działa drażniąco na skórę

H319 — Działa drażniąco na oczy

H335 — Może powodować podrażnienie dróg oddechowych

Scientific literature

Related literature

19 articles · 5 open access · Sources: PubMed, OpenAlex, Semantic Scholar

Filtry:Eksport:📄 BibTeX📑 RIS📋 EndNote🔧 CSL-JSON

📈 Publication timeline (19 articles)

1980: 1 articles19801982: 1 articles1998: 1 articles2006: 2 articles2011: 2 articles2012: 1 articles2016: 1 articles20162017: 1 articles2022: 3 articles2023: 1 articles2024: 1 articles2025: 2 articles2025

Bar height = number of articles per year. Hover dla szczegółów.

(2011) · Musing
Cytowania: 1$ PaywallDOI ↗

Dane z PubMed (NIH NLM), OpenAlex (CC0), Semantic Scholar (AI2). AI Summary wygenerowane przez Semantic Scholar TLDR. Artykuły z ikoną wymagają płatnego dostępu.

Data sources
Related molecules
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License & Provenance

MolGod 3D molecular model
5'-O-(4,4'-Dimethoxytrityl)thymidine — CAS 40615-39-2

License: CC BY-SA 4.0 (source rights NIEUSTALONE — not yet granted for this model)

MolGod License & Provenance Record:
5'-O-(4,4'-Dimethoxytrityl)thymidine (CAS 40615-39-2) — License & Provenance

Source:
5'-O-(4,4'-Dimethoxytrityl)thymidine (CAS 40615-39-2) — MolGod molecule record

Source data: PubChem CID 162419

STL: Download 3D model (1 MB)

SHA-256: 5d0b84be18479a0c21c9580f98d3cc0dc8ae7d6368855f78d31b3f03ddd308ee

Wikimedia Commons: not published yet

Source data: PubChem CID 162419

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